Track list
-Standard-
01. Opening Theme - Theme of Rockman EXE3
02. Light World Overworld - Network is Spreading (EXE3)
03. Rainy Overworld - Strange Mood? (EXE1)
04. Bunny - Deep Inside (EXE4.5)
05. Lost Woods - Life in the Network (EXE4.5)
06. Prologue - N1 Grand Prix (EXE3)
07. Kakariko Village - Hometown (EXE6)
08. Portal - Transmission (EXE6)
09. Dark World Overworld - Dangerous Black (EXE3)
10. Pull Pedestal - You're Not Alone! (EXE5)
11. File Select/Game Over - Moment of Fate (EXE1)
12. Guards Summoned - Incident Occurrence (EXE2)
13. Dark Death Mountain - Save Our Planet (EXE4)
14. Minigame - Maze of Wildness (EXE3)
15. Skull Woods Overworld - Depth (EXE5)
16. Castle - Scientific Forefront (EXE3)
17. Light World Dungeon - Smoky Field (EXE2)
18. Cave - Abandoned Mine (EXE5)
19. Boss Victory - Enemy Deleted (EXE6)
20. Sanctuary - Indoors (EXE1)
21. Boss - Great Battlers (EXE3)
22. Dark World Dungeon - Fire Field (EXE1)
23. Shop/Fortune Teller - Back Street (EXE2)
24. Cave 2 - Graveyard (EXE6)
25. Zelda's Rescue - Mayl's Theme (BCC)
26. Crystal Cutscene - Great Victory! (EXE4)
27. Fairy Fountain - Digital Strider (EXE6)
28. Agahnim's Theme (top floor of Castle Tower) - Vs. Duo (EXE4)
29. Ganon Reveals Himself - Game Over (EXE5)
30. Agahnim's Theme (drop in to Ganon) - Vs. Nebula Gray (EXE5)
31. Ganon Fight - Vs. Nebula Gray (EXE5)
32. Triforce Room - School (EXE1)
33. Ending Sequence - Future (EXE6)
34. Credits - farewell (EXE3)
-Dungeons-
35. Eastern Palace - Smoky Field (EXE2)
36. Desert Palace - Break the Storm (EXE6)
37. Agahnim's Tower - Liberation Mission (EXE5)
38. Swamp Palace - Quest in the Water (EXE5)
39. Palace of Darkness - Fear in the Castle (EXE2)
40. Misery Mire - Magnetic Airplane (EXE2)
41. Skull Woods - Fire Field (EXE1)
42. Ice Palace - Cold & Silent (EXE1)
43. Tower of Hera - Castle of Ninja (EXE5)
44. Thieves' Town - Blind Mode (EXE3)
45. Turtle Rock - Blast Speed (EXE6)
46. Ganon's Tower - A Serious Mission (EXE2)
-Bosses-
47. Eastern Palace - Battle Spirit (EXE2)
48. Desert Palace - Boss Battle (EXE3)
49. Agahnim's Tower - Vs. Duo (EXE4)
50. Swamp Palace - The Fighter's Soul (EXE4.5)
51. Palace of Darkness - Great Battlers (EXE3)
52. Misery Mire - Battle Pressure (EXE4)
53. Skull Woods - Boss Battle (EXE4)
54. Ice Palace - Net Battle! (EXE1)
55. Tower of Hera - Powerful Enemy (EXE5)
56. Thieves' Town - Tournament Battle (EXE4.5)
57. Turtle Rock - Surge of Power! (EXE6)
58. Ganon's Tower - Vs. Alpha (EXE3)
-Extra-
59. Ganon's Tower Ascent - You Will Know the Truth (EXE2)
60. Light World 2 - Running Through the Cyber World (EXE1)
61. Dark World 2 - Shine in the Dark (EXE3)